CDS

Accession Number TCMCG015C33421
gbkey CDS
Protein Id XP_027064249.1
Location complement(join(43854157..43854234,43854350..43854465,43854700..43854723,43854815..43854846,43855112..43855212,43855296..43855349,43856037..43856098,43856190..43856251,43856388..43856474,43856551..43856627,43857257..43857315,43857419..43857483,43857613..43857702,43857801..43857897,43858110..43858209,43858322..43858395,43859088..43859169,43859271..43859321,43859434..43859511,43860108..43860152,43860246..43860347,43860971..43861027,43861173..43861259,43861491..43861548,43861638..43861669,43861756..43861783,43861860..43861961,43862077..43862231,43862596..43862659,43863260..43863332,43863410..43863490,43863703..43863797,43863923..43863954,43864640..43864675))
Gene LOC113690517
GeneID 113690517
Organism Coffea arabica

Protein

Length 811aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA506972
db_source XM_027208448.1
Definition DNA mismatch repair protein MSH5-like isoform X3 [Coffea arabica]

EGGNOG-MAPPER Annotation

COG_category L
Description DNA mismatch repair protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K08741        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000228        [VIEW IN EMBL-EBI]
GO:0000280        [VIEW IN EMBL-EBI]
GO:0000710        [VIEW IN EMBL-EBI]
GO:0000712        [VIEW IN EMBL-EBI]
GO:0000793        [VIEW IN EMBL-EBI]
GO:0000794        [VIEW IN EMBL-EBI]
GO:0000795        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003690        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006298        [VIEW IN EMBL-EBI]
GO:0006310        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0007059        [VIEW IN EMBL-EBI]
GO:0007127        [VIEW IN EMBL-EBI]
GO:0007129        [VIEW IN EMBL-EBI]
GO:0007131        [VIEW IN EMBL-EBI]
GO:0008094        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010777        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0030983        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035825        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043073        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044454        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045132        [VIEW IN EMBL-EBI]
GO:0045143        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048285        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051026        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051304        [VIEW IN EMBL-EBI]
GO:0051307        [VIEW IN EMBL-EBI]
GO:0051321        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0061982        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070192        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0098813        [VIEW IN EMBL-EBI]
GO:0099086        [VIEW IN EMBL-EBI]
GO:0140013        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1903046        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAAGAAGTTGACGAAACAGAGGCCACACCTCAGGTCTATATGGCTTGTATCATGCAAGGTCATAGAATTGGAGTTTCATACTATGATTCCAGTATCCGACAGCTGTACGTGCTTGAGTTCTGGGAAGATGGAAGTGAAGATTTCCCGTTGGTAGATATGATAATATATCAAGCCAAACCATCCATCATTTACACAAGCACAAAAAGTGAGGAGCTGTTCTTGGCTGCTTTACAAAAAAATGACGGAACAAGTAATGCAGCTACTGTAAAGCTTGTCAAGAGTTCATTATTCAGCTACGAGCAAGCATGGCATAGATTAATGTACCTTCGGGTCACAGGGATGGATGATGGGTTGAACATAAAGGAAAGAATGTCTTTTCTGAACTCCATGATGGACATTCAAAGTGAGGTCCAAGTTCGTGCAACTGGAGGGCTTCTTGCGGTTCTAGAGAATGAAAGGATTATAGGCACCCTTGAACAGAAGGAGTGTGGAAGTGCATCCATTGCTGTTGACTCAGTCATTGAAATCTCACTAAACAAGTTTCTCAAAGTTGACTCGGCTGCACATGAGGCATTGCAAATATTCCAAATTGACAAACATCCAAGCCACATGGGGATTGGCAGGGCAAAAGAAGGGTTCTCTTTATTTGGAATGATGAATAAGTGTGTAACACCAATGGGCAGACGTCTTTTGAGGAACTGGTTTTTGAGGCCTATACTGGACATTGAGAAACTGAACAAGCGTTTTGATGCTATAACATTCTTCCATTCTGCTGAAGAACTTTTGGCCTCTCTGCGTGAAACACTGCAGTCCATAAAAGATATTCCTCACATACTCAAGAAGTTCAATTCTCCAAGTTCTTTGTGCACAAGTAGCGACTGGAAAGCTTTTGTAAAGAGCATTTGTTCTCTCTTGCACATAAACAAAATATTTGAAGTTGGCATTTCAGAAAATCTTCAAGAAGAATTGAAGTATTTGAACTTGGACATTGTTGAACAGGTTGAATTTTACCTATCTGCGGATCTGGCATATGTCTATGAATTGGTTGTTGGCGTTGTTGATGTGAATCGAAGTAAGGATAAAGGTTATGAGACTATTGTTAAAGATGGTTTTTGCGATGAGTTGGATGAGCTGAGGCAAATATATGAGGAGTTGCCAGAGTTTTTGGAAGAGGTTTCATCAGTGGAACTCACACGGCTGCCTTACATGTCTGGAGACAAGTTCATTCCTTGTATTGTGTATATCCATCAGATAGGGTACTTGATGTGCATTTTCCAAGAAAATCTTGACAAAAGCATGCTGGAAAAACTTGAAGATTATGAATTTGCTTTCTCCGATGAGGATGAGAATACTAAGAAATTTTTTTATCGCACTGCAAAGACACGGGAATTGGATAGCCTTCTTGGAGATCTATATCATAAAATATTGGACATGGAGAGAGCAATCATTGGGGACTTAGTTTCTCGGATTCTTCAGTTCTCTTCACATTTAAAACAAGCTGTTAATTTTGTTGCTGAGCTTGATTGTTTCTTGTCTTTAGCATTGGTTGCTCGTCAGAACAATTATGTGAGGCCCATTGTGACTGTTGAAAATTTGCTTGATATACTAAACGGAAGACATGTACTTCAAGAAATGACAGTAGACACATTCATACCCAATGATACAAAGATTCTGCATGACGGAAGGGTTAATATCATCACTGGCCCTAATTATTCAGGAAAAAGCATCTACATAAAGCAGGTCGCATTGATAGTTTTCCTTTCACATATTGGGAGTTTTGTACCTGCTGATGCTGCTATTGTGGGCTTGACGGATAGGATATTTTGTGCAACTGGGAGCAAATTCATGACAGCTGAACAATCAACATTCATGATTGATTTGCATCAAGTGGGAGTGATGCTAAGGCATGCAACTTCTCGATCATTGTGCTTGTTAGATGAATTTGGGAAAGGCACGCTTACAGTAGATGGCGTTGGTCTTCTCGGTGGAACTATAAACCATTTTGTCTCGTGCTATGATCCTCCTAAGGTTTTTATCTGTACTCATTTGACTGAGCTATTTGACAATAGCTGTTTACTGGAGCTTGACAACTTTCAGTGTGACAAGGTCAAGTATTACACCATGAGCGTGCTGAATCCAGACAATAAAGAGAATGATATTGAAGATATAGTGTTTTTGTATAGGTTGGTTCCTGGACGTGCAGCTCTTAGCTATGGTCTACATTGTGCACTTCTTGCTGGAGTATTCGAGGGAGTCATAAAAAGAGCATCTCTTGTGTTGGATGCTATTCAAGACAACAAGCACATTGAGCGACTAAGCAATGAGAATATATCTGCTCAGGATCAGCAATACAAGAATGCAGTGGACAAAGTGTTAGCTCTTGATGCCCTCAAGGACGATCTATCTGTCTTCTTTCAAGACGTTTTTCCTTAA
Protein:  
MEEVDETEATPQVYMACIMQGHRIGVSYYDSSIRQLYVLEFWEDGSEDFPLVDMIIYQAKPSIIYTSTKSEELFLAALQKNDGTSNAATVKLVKSSLFSYEQAWHRLMYLRVTGMDDGLNIKERMSFLNSMMDIQSEVQVRATGGLLAVLENERIIGTLEQKECGSASIAVDSVIEISLNKFLKVDSAAHEALQIFQIDKHPSHMGIGRAKEGFSLFGMMNKCVTPMGRRLLRNWFLRPILDIEKLNKRFDAITFFHSAEELLASLRETLQSIKDIPHILKKFNSPSSLCTSSDWKAFVKSICSLLHINKIFEVGISENLQEELKYLNLDIVEQVEFYLSADLAYVYELVVGVVDVNRSKDKGYETIVKDGFCDELDELRQIYEELPEFLEEVSSVELTRLPYMSGDKFIPCIVYIHQIGYLMCIFQENLDKSMLEKLEDYEFAFSDEDENTKKFFYRTAKTRELDSLLGDLYHKILDMERAIIGDLVSRILQFSSHLKQAVNFVAELDCFLSLALVARQNNYVRPIVTVENLLDILNGRHVLQEMTVDTFIPNDTKILHDGRVNIITGPNYSGKSIYIKQVALIVFLSHIGSFVPADAAIVGLTDRIFCATGSKFMTAEQSTFMIDLHQVGVMLRHATSRSLCLLDEFGKGTLTVDGVGLLGGTINHFVSCYDPPKVFICTHLTELFDNSCLLELDNFQCDKVKYYTMSVLNPDNKENDIEDIVFLYRLVPGRAALSYGLHCALLAGVFEGVIKRASLVLDAIQDNKHIERLSNENISAQDQQYKNAVDKVLALDALKDDLSVFFQDVFP